Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD28P10747 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CD28P10747 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD28P10747 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 AC093525.10-201ENST00000625130 1569 ntBASIC14.47□□□□□ -0.09
CD28P10747 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.47□□□□□ -0.09
CD28P10747 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.47□□□□□ -0.09
CD28P10747 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 KRT8P32-201ENST00000512863 1461 ntBASIC14.47□□□□□ -0.09
CD28P10747 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 AC026396.1-201ENST00000419388 421 ntBASIC14.47□□□□□ -0.09
CD28P10747 TSPY22P-201ENST00000427496 604 ntBASIC14.47□□□□□ -0.09
CD28P10747 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 KRT8P26-201ENST00000534154 1276 ntBASIC14.47□□□□□ -0.09
CD28P10747 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.47□□□□□ -0.09
CD28P10747 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.47□□□□□ -0.09
CD28P10747 AP002414.4-201ENST00000589764 1148 ntBASIC14.47□□□□□ -0.09
CD28P10747 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.47□□□□□ -0.09
CD28P10747 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 KRT8P7-201ENST00000533003 1432 ntBASIC14.47□□□□□ -0.09
CD28P10747 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.47□□□□□ -0.09
CD28P10747 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.47□□□□□ -0.09
CD28P10747 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD28P10747 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.46□□□□□ -0.09
CD28P10747 AC141586.3-201ENST00000562166 1838 ntBASIC14.46□□□□□ -0.09
CD28P10747 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 FP475955.4-201ENST00000623131 1990 ntBASIC14.46□□□□□ -0.09
CD28P10747 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD28P10747 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD28P10747 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.46□□□□□ -0.09
CD28P10747 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 MIR662-201ENST00000384847 95 ntBASIC14.46□□□□□ -0.09
CD28P10747 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.46□□□□□ -0.09
CD28P10747 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.46□□□□□ -0.09
CD28P10747 AP002383.4-201ENST00000442518 975 ntBASIC14.46□□□□□ -0.09
CD28P10747 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.46□□□□□ -0.09
CD28P10747 MIR3180-1-201ENST00000580374 94 ntBASIC14.46□□□□□ -0.09
CD28P10747 MIR3180-3-201ENST00000584616 94 ntBASIC14.46□□□□□ -0.09
CD28P10747 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD28P10747 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD28P10747 HOXB1-202ENST00000577092 1414 ntBASIC14.46□□□□□ -0.09
CD28P10747 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD28P10747 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.46□□□□□ -0.09
CD28P10747 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.46□□□□□ -0.1
CD28P10747 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CD28P10747 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.46□□□□□ -0.1
CD28P10747 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD28P10747 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.46□□□□□ -0.1
CD28P10747 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD28P10747 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD28P10747 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.46□□□□□ -0.1
CD28P10747 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.46□□□□□ -0.1
CD28P10747 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
CD28P10747 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.45□□□□□ -0.1
CD28P10747 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.45□□□□□ -0.1
CD28P10747 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD28P10747 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms