Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 CHCHD2P8-201ENST00000429873 447 ntBASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 TPM4P1-201ENST00000436100 807 ntBASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 MIR3180-1-201ENST00000580374 94 ntBASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 MIR3180-3-201ENST00000584616 94 ntBASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 AC068587.9-201ENST00000641814 219 ntBASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 TSPY22P-201ENST00000427496 604 ntBASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 AP002383.4-201ENST00000442518 975 ntBASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 AC009065.1-201ENST00000564055 1225 ntBASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 AC006333.2-201ENST00000607957 2099 ntBASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB40ALP0C0E4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 AC093484.2-201ENST00000580996 2166 ntBASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 AL121894.2-201ENST00000602977 491 ntBASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40ALP0C0E4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms