Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 MMP23A-201ENST00000234610 1017 ntBASIC19.19■□□□□ 0.66
CD48P09326 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.19■□□□□ 0.66
CD48P09326 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.19■□□□□ 0.66
CD48P09326 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.19■□□□□ 0.66
CD48P09326 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CD48P09326 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.19■□□□□ 0.66
CD48P09326 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CD48P09326 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.19■□□□□ 0.66
CD48P09326 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD48P09326 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.19■□□□□ 0.66
CD48P09326 NOC2LP1-202ENST00000452600 2235 ntBASIC19.19■□□□□ 0.66
CD48P09326 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.18■□□□□ 0.66
CD48P09326 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.18■□□□□ 0.66
CD48P09326 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
CD48P09326 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 EGLN1P1-201ENST00000531623 762 ntBASIC19.18■□□□□ 0.66
CD48P09326 WWOX-216ENST00000569818 525 ntBASIC19.18■□□□□ 0.66
CD48P09326 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.18■□□□□ 0.66
CD48P09326 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CD48P09326 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.18■□□□□ 0.66
CD48P09326 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.18■□□□□ 0.66
CD48P09326 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.18■□□□□ 0.66
CD48P09326 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.18■□□□□ 0.66
CD48P09326 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CD48P09326 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CD48P09326 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.18■□□□□ 0.66
CD48P09326 AC093677.2-201ENST00000600169 1863 ntBASIC19.18■□□□□ 0.66
CD48P09326 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD48P09326 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CD48P09326 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CD48P09326 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.17■□□□□ 0.66
CD48P09326 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.17■□□□□ 0.66
CD48P09326 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CD48P09326 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.17■□□□□ 0.66
CD48P09326 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.17■□□□□ 0.66
CD48P09326 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.17■□□□□ 0.66
CD48P09326 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.17■□□□□ 0.66
CD48P09326 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD48P09326 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
CD48P09326 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CD48P09326 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD48P09326 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.16■□□□□ 0.66
CD48P09326 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.16■□□□□ 0.66
CD48P09326 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.16■□□□□ 0.66
CD48P09326 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CD48P09326 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CD48P09326 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.16■□□□□ 0.66
CD48P09326 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CD48P09326 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.16■□□□□ 0.66
CD48P09326 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 AL162741.1-201ENST00000565563 1558 ntBASIC19.16■□□□□ 0.66
CD48P09326 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CD48P09326 AP000593.1-201ENST00000393668 712 ntBASIC19.16■□□□□ 0.66
CD48P09326 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 ECEL1P2-202ENST00000465689 757 ntBASIC19.16■□□□□ 0.66
CD48P09326 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.16■□□□□ 0.66
CD48P09326 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.16■□□□□ 0.66
CD48P09326 NAPSB-206ENST00000562112 1266 ntBASIC19.16■□□□□ 0.66
CD48P09326 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms