Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 AF186192.3-201ENST00000583427 947 ntBASIC16.66■□□□□ 0.26
HLA-DQA2P01906 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.66■□□□□ 0.26
HLA-DQA2P01906 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA2P01906 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 FAM207BP-201ENST00000447172 505 ntBASIC16.65■□□□□ 0.26
HLA-DQA2P01906 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 AC073195.1-201ENST00000607241 877 ntBASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQA2P01906 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HLA-DQA2P01906 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 KRT8P3-201ENST00000519669 1449 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 KRT18P29-201ENST00000397031 1267 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 RARRES2P10-201ENST00000564312 460 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 AC026271.3-201ENST00000571884 352 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 AC068587.9-201ENST00000641814 219 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 AL499627.1-201ENST00000569373 2188 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 BICD1-207ENST00000551848 1962 ntBASIC16.64■□□□□ 0.25
HLA-DQA2P01906 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQA2P01906 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA2P01906 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HLA-DQA2P01906 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA2P01906 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA2P01906 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms