Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.4■□□□□ 0.7
TRUB2O95900 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.4■□□□□ 0.7
TRUB2O95900 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 KRT18P23-201ENST00000435622 1283 ntBASIC19.4■□□□□ 0.7
TRUB2O95900 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.4■□□□□ 0.7
TRUB2O95900 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.4■□□□□ 0.7
TRUB2O95900 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.4■□□□□ 0.7
TRUB2O95900 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.4■□□□□ 0.7
TRUB2O95900 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRUB2O95900 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRUB2O95900 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.4■□□□□ 0.7
TRUB2O95900 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.4■□□□□ 0.7
TRUB2O95900 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRUB2O95900 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRUB2O95900 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TRUB2O95900 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TRUB2O95900 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRUB2O95900 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRUB2O95900 BICD1-207ENST00000551848 1962 ntBASIC19.39■□□□□ 0.7
TRUB2O95900 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRUB2O95900 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 AC135050.7-201ENST00000624508 2218 ntBASIC19.39■□□□□ 0.69
TRUB2O95900 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.39■□□□□ 0.69
TRUB2O95900 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.39■□□□□ 0.69
TRUB2O95900 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.39■□□□□ 0.69
TRUB2O95900 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.39■□□□□ 0.69
TRUB2O95900 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRUB2O95900 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.39■□□□□ 0.69
TRUB2O95900 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.39■□□□□ 0.69
TRUB2O95900 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 YBX1P2-201ENST00000489612 999 ntBASIC19.39■□□□□ 0.69
TRUB2O95900 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.39■□□□□ 0.69
TRUB2O95900 AC140113.3-201ENST00000605663 199 ntBASIC19.39■□□□□ 0.69
TRUB2O95900 AC112497.1-201ENST00000624824 639 ntBASIC19.39■□□□□ 0.69
TRUB2O95900 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.39■□□□□ 0.69
TRUB2O95900 AL031432.5-201ENST00000641059 760 ntBASIC19.39■□□□□ 0.69
TRUB2O95900 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRUB2O95900 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRUB2O95900 HOXB1-202ENST00000577092 1414 ntBASIC19.39■□□□□ 0.69
TRUB2O95900 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.39■□□□□ 0.69
TRUB2O95900 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB2O95900 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.38■□□□□ 0.69
TRUB2O95900 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRUB2O95900 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRUB2O95900 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRUB2O95900 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.38■□□□□ 0.69
TRUB2O95900 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TRUB2O95900 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRUB2O95900 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TRUB2O95900 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.38■□□□□ 0.69
TRUB2O95900 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRUB2O95900 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.38■□□□□ 0.69
TRUB2O95900 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.38■□□□□ 0.69
TRUB2O95900 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.38■□□□□ 0.69
TRUB2O95900 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.38■□□□□ 0.69
TRUB2O95900 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 KRT8P7-201ENST00000533003 1432 ntBASIC19.38■□□□□ 0.69
TRUB2O95900 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 AC011558.1-201ENST00000623459 338 ntBASIC19.38■□□□□ 0.69
TRUB2O95900 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRUB2O95900 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB2O95900 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB2O95900 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TRUB2O95900 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB2O95900 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB2O95900 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB2O95900 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.37■□□□□ 0.69
TRUB2O95900 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms