Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SCAF4O95104 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SCAF4O95104 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SCAF4O95104 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.17■□□□□ 0.02
SCAF4O95104 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 SIRPAP1-201ENST00000448467 1770 ntBASIC15.17■□□□□ 0.02
SCAF4O95104 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.17■□□□□ 0.02
SCAF4O95104 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAF4O95104 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAF4O95104 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.17■□□□□ 0.02
SCAF4O95104 AL121906.2-201ENST00000621597 723 ntBASIC15.17■□□□□ 0.02
SCAF4O95104 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.17■□□□□ 0.02
SCAF4O95104 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAF4O95104 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.17■□□□□ 0.02
SCAF4O95104 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SCAF4O95104 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.16■□□□□ 0.02
SCAF4O95104 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 AC060766.5-201ENST00000590539 871 ntBASIC15.16■□□□□ 0.02
SCAF4O95104 HLA-B-256ENST00000639848 1089 ntBASIC15.16■□□□□ 0.02
SCAF4O95104 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 AC008894.3-201ENST00000624324 3103 ntBASIC15.16■□□□□ 0.02
SCAF4O95104 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 OR6D1P-203ENST00000641209 4860 ntBASIC15.16■□□□□ 0.02
SCAF4O95104 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SCAF4O95104 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAF4O95104 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCAF4O95104 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SCAF4O95104 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SCAF4O95104 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.15■□□□□ 0.02
SCAF4O95104 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
SCAF4O95104 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.15■□□□□ 0.02
SCAF4O95104 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.15■□□□□ 0.02
SCAF4O95104 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.15■□□□□ 0.02
SCAF4O95104 PNMA6B-201ENST00000538162 1200 ntBASIC15.15■□□□□ 0.02
SCAF4O95104 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.15■□□□□ 0.02
SCAF4O95104 AC005829.2-201ENST00000571422 1056 ntBASIC15.15■□□□□ 0.02
SCAF4O95104 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
SCAF4O95104 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms