Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.09■□□□□ 0.33
NKX2-2O95096 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-2O95096 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NKX2-2O95096 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-2O95096 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-2O95096 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-2O95096 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-2O95096 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-2O95096 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
NKX2-2O95096 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-2O95096 SDHAP2-201ENST00000455183 2001 ntBASIC17.08■□□□□ 0.33
NKX2-2O95096 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-2O95096 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.08■□□□□ 0.33
NKX2-2O95096 AL354751.1-201ENST00000412768 1863 ntBASIC17.08■□□□□ 0.33
NKX2-2O95096 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-2O95096 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
NKX2-2O95096 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-2O95096 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-2O95096 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NKX2-2O95096 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-2O95096 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NKX2-2O95096 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.08■□□□□ 0.32
NKX2-2O95096 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-2O95096 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.08■□□□□ 0.32
NKX2-2O95096 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 SEC1P-202ENST00000473944 940 ntBASIC17.08■□□□□ 0.32
NKX2-2O95096 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.08■□□□□ 0.32
NKX2-2O95096 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.08■□□□□ 0.32
NKX2-2O95096 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.08■□□□□ 0.32
NKX2-2O95096 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-2O95096 AC141257.4-201ENST00000634557 245 ntBASIC17.08■□□□□ 0.32
NKX2-2O95096 AC136944.6-201ENST00000634818 245 ntBASIC17.08■□□□□ 0.32
NKX2-2O95096 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NKX2-2O95096 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NKX2-2O95096 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.08■□□□□ 0.32
NKX2-2O95096 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-2O95096 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NKX2-2O95096 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-2O95096 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-2O95096 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NKX2-2O95096 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-2O95096 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-2O95096 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NKX2-2O95096 AP000523.1-201ENST00000398242 1049 ntBASIC17.07■□□□□ 0.32
NKX2-2O95096 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-2O95096 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.07■□□□□ 0.32
NKX2-2O95096 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-2O95096 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-2O95096 AC010240.3-201ENST00000607688 395 ntBASIC17.07■□□□□ 0.32
NKX2-2O95096 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-2O95096 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NKX2-2O95096 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-2O95096 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-2O95096 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-2O95096 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-2O95096 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-2O95096 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX2-2O95096 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NKX2-2O95096 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-2O95096 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
NKX2-2O95096 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX2-2O95096 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-2O95096 AC024243.1-201ENST00000609234 778 ntBASIC17.06■□□□□ 0.32
NKX2-2O95096 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NKX2-2O95096 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-2O95096 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-2O95096 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX2-2O95096 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms