Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
TRIM13O60858 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM13O60858 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM13O60858 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM13O60858 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM13O60858 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM13O60858 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM13O60858 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM13O60858 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM13O60858 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM13O60858 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM13O60858 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM13O60858 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM13O60858 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM13O60858 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM13O60858 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM13O60858 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM13O60858 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM13O60858 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM13O60858 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM13O60858 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM13O60858 KRT18P41-201ENST00000518924 1277 ntBASIC18.25■□□□□ 0.51
TRIM13O60858 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM13O60858 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM13O60858 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM13O60858 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM13O60858 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 REXO1L9P-201ENST00000604264 2108 ntBASIC18.25■□□□□ 0.51
TRIM13O60858 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM13O60858 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM13O60858 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM13O60858 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM13O60858 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM13O60858 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM13O60858 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM13O60858 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM13O60858 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM13O60858 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM13O60858 AC004951.3-201ENST00000418645 1148 ntBASIC18.24■□□□□ 0.51
TRIM13O60858 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.24■□□□□ 0.51
TRIM13O60858 RNA5SP413-201ENST00000516373 109 ntBASIC18.24■□□□□ 0.51
TRIM13O60858 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.24■□□□□ 0.51
TRIM13O60858 LINC00896-202ENST00000609602 2128 ntBASIC18.24■□□□□ 0.51
TRIM13O60858 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM13O60858 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM13O60858 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 FZD10-202ENST00000539839 3282 ntBASIC18.24■□□□□ 0.51
TRIM13O60858 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM13O60858 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM13O60858 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM13O60858 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM13O60858 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
TRIM13O60858 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM13O60858 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM13O60858 AC133681.1-201ENST00000465482 601 ntBASIC18.23■□□□□ 0.51
TRIM13O60858 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM13O60858 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM13O60858 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRIM13O60858 AC124016.1-201ENST00000609552 612 ntBASIC18.23■□□□□ 0.51
TRIM13O60858 AL353708.3-201ENST00000610272 989 ntBASIC18.23■□□□□ 0.51
TRIM13O60858 AC110285.5-201ENST00000611501 352 ntBASIC18.23■□□□□ 0.51
TRIM13O60858 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms