Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LCMT2O60294 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LCMT2O60294 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.7■□□□□ 0.42
LCMT2O60294 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LCMT2O60294 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LCMT2O60294 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LCMT2O60294 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 AP000523.1-201ENST00000398242 1049 ntBASIC17.7■□□□□ 0.42
LCMT2O60294 TMPOP1-202ENST00000424642 1267 ntBASIC17.7■□□□□ 0.42
LCMT2O60294 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.7■□□□□ 0.42
LCMT2O60294 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.7■□□□□ 0.42
LCMT2O60294 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.7■□□□□ 0.42
LCMT2O60294 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.7■□□□□ 0.42
LCMT2O60294 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.7■□□□□ 0.42
LCMT2O60294 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 AL031432.5-201ENST00000641059 760 ntBASIC17.7■□□□□ 0.42
LCMT2O60294 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 AL163051.1-201ENST00000569214 1512 ntBASIC17.7■□□□□ 0.42
LCMT2O60294 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LCMT2O60294 AC073592.3-201ENST00000625118 1834 ntBASIC17.7■□□□□ 0.42
LCMT2O60294 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LCMT2O60294 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.69■□□□□ 0.42
LCMT2O60294 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LCMT2O60294 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LCMT2O60294 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LCMT2O60294 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.69■□□□□ 0.42
LCMT2O60294 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.69■□□□□ 0.42
LCMT2O60294 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.69■□□□□ 0.42
LCMT2O60294 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.69■□□□□ 0.42
LCMT2O60294 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LCMT2O60294 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LCMT2O60294 AK4P3-201ENST00000418260 669 ntBASIC17.69■□□□□ 0.42
LCMT2O60294 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.69■□□□□ 0.42
LCMT2O60294 AC010240.3-201ENST00000607688 395 ntBASIC17.69■□□□□ 0.42
LCMT2O60294 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.69■□□□□ 0.42
LCMT2O60294 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
LCMT2O60294 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.69■□□□□ 0.42
LCMT2O60294 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 AC138932.1-201ENST00000534164 6830 ntBASIC17.69■□□□□ 0.42
LCMT2O60294 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.69■□□□□ 0.42
LCMT2O60294 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LCMT2O60294 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.69■□□□□ 0.42
LCMT2O60294 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LCMT2O60294 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.68■□□□□ 0.42
LCMT2O60294 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.68■□□□□ 0.42
LCMT2O60294 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.68■□□□□ 0.42
LCMT2O60294 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LCMT2O60294 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.68■□□□□ 0.42
LCMT2O60294 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.68■□□□□ 0.42
LCMT2O60294 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 TSPY5P-201ENST00000426936 936 ntBASIC17.68■□□□□ 0.42
LCMT2O60294 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.68■□□□□ 0.42
LCMT2O60294 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 FAM210CP-201ENST00000445714 574 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms