Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD6O43541 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SMAD6O43541 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.68■□□□□ 0.58
SMAD6O43541 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD6O43541 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD6O43541 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SMAD6O43541 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.67■□□□□ 0.58
SMAD6O43541 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.67■□□□□ 0.58
SMAD6O43541 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.67■□□□□ 0.58
SMAD6O43541 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD6O43541 RNF126P1-202ENST00000569893 925 ntBASIC18.67■□□□□ 0.58
SMAD6O43541 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.67■□□□□ 0.58
SMAD6O43541 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.67■□□□□ 0.58
SMAD6O43541 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 SDHAP2-201ENST00000455183 2001 ntBASIC18.67■□□□□ 0.58
SMAD6O43541 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMAD6O43541 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMAD6O43541 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD6O43541 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMAD6O43541 BX323043.1-201ENST00000641006 1765 ntBASIC18.66■□□□□ 0.58
SMAD6O43541 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.66■□□□□ 0.58
SMAD6O43541 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 MIR149-201ENST00000384879 89 ntBASIC18.66■□□□□ 0.58
SMAD6O43541 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SMAD6O43541 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMAD6O43541 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.66■□□□□ 0.58
SMAD6O43541 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.66■□□□□ 0.58
SMAD6O43541 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 AC126763.1-201ENST00000552015 2118 ntBASIC18.66■□□□□ 0.58
SMAD6O43541 AC009065.1-201ENST00000564055 1225 ntBASIC18.66■□□□□ 0.58
SMAD6O43541 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.66■□□□□ 0.58
SMAD6O43541 AC011498.5-201ENST00000592027 486 ntBASIC18.66■□□□□ 0.58
SMAD6O43541 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.66■□□□□ 0.58
SMAD6O43541 AC093458.2-201ENST00000623150 629 ntBASIC18.66■□□□□ 0.58
SMAD6O43541 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SMAD6O43541 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.66■□□□□ 0.58
SMAD6O43541 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SMAD6O43541 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD6O43541 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.66■□□□□ 0.58
SMAD6O43541 AC093503.3-201ENST00000624917 2352 ntBASIC18.66■□□□□ 0.58
SMAD6O43541 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
SMAD6O43541 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
SMAD6O43541 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
SMAD6O43541 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SMAD6O43541 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMAD6O43541 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SMAD6O43541 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.65■□□□□ 0.58
SMAD6O43541 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.65■□□□□ 0.58
SMAD6O43541 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.65■□□□□ 0.58
SMAD6O43541 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.65■□□□□ 0.58
SMAD6O43541 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SMAD6O43541 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMAD6O43541 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 TNXA-203ENST00000507684 2038 ntBASIC18.65■□□□□ 0.58
SMAD6O43541 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
SMAD6O43541 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.65■□□□□ 0.58
SMAD6O43541 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 AC009102.3-201ENST00000623118 1491 ntBASIC18.65■□□□□ 0.58
SMAD6O43541 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD6O43541 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMAD6O43541 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMAD6O43541 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
SMAD6O43541 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.64■□□□□ 0.57
SMAD6O43541 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD6O43541 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD6O43541 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD6O43541 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD6O43541 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.64■□□□□ 0.57
SMAD6O43541 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD6O43541 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms