Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF113AO15541 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.19■■□□□ 1.14
RNF113AO15541 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.19■■□□□ 1.14
RNF113AO15541 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF113AO15541 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF113AO15541 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF113AO15541 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF113AO15541 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RNF113AO15541 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF113AO15541 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF113AO15541 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF113AO15541 AL391807.1-203ENST00000604392 2365 ntBASIC22.19■■□□□ 1.14
RNF113AO15541 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF113AO15541 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF113AO15541 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF113AO15541 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RNF113AO15541 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF113AO15541 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF113AO15541 HBZP1-201ENST00000354915 429 ntBASIC22.18■■□□□ 1.14
RNF113AO15541 AL031133.1-201ENST00000406807 723 ntBASIC22.18■■□□□ 1.14
RNF113AO15541 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF113AO15541 AL671277.2-201ENST00000458060 996 ntBASIC22.18■■□□□ 1.14
RNF113AO15541 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF113AO15541 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF113AO15541 AL445228.2-201ENST00000605589 952 ntBASIC22.18■■□□□ 1.14
RNF113AO15541 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.18■■□□□ 1.14
RNF113AO15541 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
RNF113AO15541 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF113AO15541 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF113AO15541 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF113AO15541 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF113AO15541 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF113AO15541 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF113AO15541 LINC01311-201ENST00000565162 1445 ntBASIC22.17■■□□□ 1.14
RNF113AO15541 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RNF113AO15541 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF113AO15541 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF113AO15541 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
RNF113AO15541 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
RNF113AO15541 HLA-F-220ENST00000434407 884 ntBASIC22.17■■□□□ 1.14
RNF113AO15541 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF113AO15541 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF113AO15541 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF113AO15541 AL136038.4-201ENST00000603606 1261 ntBASIC22.17■■□□□ 1.14
RNF113AO15541 AC083849.1-201ENST00000615227 514 ntBASIC22.17■■□□□ 1.14
RNF113AO15541 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF113AO15541 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.17■■□□□ 1.14
RNF113AO15541 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RNF113AO15541 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF113AO15541 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF113AO15541 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF113AO15541 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF113AO15541 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RNF113AO15541 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RNF113AO15541 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF113AO15541 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF113AO15541 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF113AO15541 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
RNF113AO15541 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF113AO15541 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF113AO15541 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF113AO15541 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF113AO15541 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RNF113AO15541 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF113AO15541 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF113AO15541 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF113AO15541 SPDYE13P-201ENST00000445314 798 ntBASIC22.15■■□□□ 1.14
RNF113AO15541 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF113AO15541 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF113AO15541 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms