Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.8■□□□□ 0.76
SPTLC1O15269 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SPTLC1O15269 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SPTLC1O15269 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.79■□□□□ 0.76
SPTLC1O15269 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SPTLC1O15269 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SPTLC1O15269 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.79■□□□□ 0.76
SPTLC1O15269 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.79■□□□□ 0.76
SPTLC1O15269 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.79■□□□□ 0.76
SPTLC1O15269 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SPTLC1O15269 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SPTLC1O15269 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.79■□□□□ 0.76
SPTLC1O15269 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC1O15269 AL162741.1-201ENST00000565563 1558 ntBASIC19.78■□□□□ 0.76
SPTLC1O15269 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC1O15269 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC1O15269 AP000974.1-201ENST00000623909 2387 ntBASIC19.78■□□□□ 0.76
SPTLC1O15269 AL163051.1-201ENST00000569214 1512 ntBASIC19.78■□□□□ 0.76
SPTLC1O15269 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC1O15269 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC1O15269 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC1O15269 MIR662-201ENST00000384847 95 ntBASIC19.78■□□□□ 0.76
SPTLC1O15269 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC1O15269 PVRIG2P-201ENST00000435460 978 ntBASIC19.78■□□□□ 0.76
SPTLC1O15269 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.78■□□□□ 0.76
SPTLC1O15269 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC1O15269 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.78■□□□□ 0.76
SPTLC1O15269 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.78■□□□□ 0.76
SPTLC1O15269 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC1O15269 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPTLC1O15269 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.78■□□□□ 0.76
SPTLC1O15269 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.78■□□□□ 0.76
SPTLC1O15269 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC1O15269 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC1O15269 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPTLC1O15269 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.77■□□□□ 0.76
SPTLC1O15269 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SPTLC1O15269 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SPTLC1O15269 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SPTLC1O15269 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.77■□□□□ 0.76
SPTLC1O15269 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.77■□□□□ 0.76
SPTLC1O15269 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.77■□□□□ 0.76
SPTLC1O15269 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC1O15269 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.77■□□□□ 0.76
SPTLC1O15269 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.77■□□□□ 0.76
SPTLC1O15269 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC1O15269 CLEC4GP1-201ENST00000596555 870 ntBASIC19.77■□□□□ 0.76
SPTLC1O15269 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC1O15269 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC1O15269 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SPTLC1O15269 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPTLC1O15269 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPTLC1O15269 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.76■□□□□ 0.75
SPTLC1O15269 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SPTLC1O15269 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SPTLC1O15269 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC1O15269 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC1O15269 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC1O15269 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC1O15269 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.76■□□□□ 0.75
SPTLC1O15269 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC1O15269 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SPTLC1O15269 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.76■□□□□ 0.75
SPTLC1O15269 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.76■□□□□ 0.75
SPTLC1O15269 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.76■□□□□ 0.75
SPTLC1O15269 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.76■□□□□ 0.75
SPTLC1O15269 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.76■□□□□ 0.75
SPTLC1O15269 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SPTLC1O15269 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SPTLC1O15269 CROCCP3-202ENST00000420820 1947 ntBASIC19.76■□□□□ 0.75
SPTLC1O15269 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.76■□□□□ 0.75
SPTLC1O15269 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC1O15269 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC1O15269 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SPTLC1O15269 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.75■□□□□ 0.75
SPTLC1O15269 AC093525.10-201ENST00000625130 1569 ntBASIC19.75■□□□□ 0.75
SPTLC1O15269 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms