Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TO15178 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TO15178 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TO15178 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TO15178 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TO15178 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TO15178 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TO15178 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TO15178 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.04■□□□□ 0.32
TO15178 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TO15178 MIR149-201ENST00000384879 89 ntBASIC17.04■□□□□ 0.32
TO15178 HOMER2P1-201ENST00000455653 964 ntBASIC17.04■□□□□ 0.32
TO15178 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TO15178 KRT18P21-201ENST00000515767 1272 ntBASIC17.04■□□□□ 0.32
TO15178 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TO15178 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.04■□□□□ 0.32
TO15178 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TO15178 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.04■□□□□ 0.32
TO15178 WIZP1-201ENST00000531444 2299 ntBASIC17.04■□□□□ 0.32
TO15178 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TO15178 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TO15178 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TO15178 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
TO15178 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TO15178 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.03■□□□□ 0.32
TO15178 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TO15178 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TO15178 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 STARP1-201ENST00000397973 869 ntBASIC17.03■□□□□ 0.32
TO15178 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.03■□□□□ 0.32
TO15178 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.03■□□□□ 0.32
TO15178 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.03■□□□□ 0.32
TO15178 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.03■□□□□ 0.32
TO15178 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TO15178 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TO15178 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.03■□□□□ 0.32
TO15178 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.03■□□□□ 0.32
TO15178 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TO15178 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TO15178 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TO15178 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.02■□□□□ 0.32
TO15178 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TO15178 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.02■□□□□ 0.32
TO15178 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 DUX4L26-201ENST00000489078 1255 ntBASIC17.02■□□□□ 0.32
TO15178 AC063952.2-201ENST00000498792 1227 ntBASIC17.02■□□□□ 0.32
TO15178 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.02■□□□□ 0.32
TO15178 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
TO15178 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TO15178 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TO15178 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TO15178 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TO15178 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TO15178 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.02■□□□□ 0.31
TO15178 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TO15178 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TO15178 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.02■□□□□ 0.31
TO15178 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.02■□□□□ 0.31
TO15178 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.02■□□□□ 0.31
TO15178 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms