Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 TSPY5P-201ENST00000426936 936 ntBASIC17.45■□□□□ 0.38
CLDN4O14493 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.45■□□□□ 0.38
CLDN4O14493 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 AC011558.1-201ENST00000623459 338 ntBASIC17.45■□□□□ 0.38
CLDN4O14493 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN4O14493 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN4O14493 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN4O14493 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN4O14493 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN4O14493 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN4O14493 AC104076.2-201ENST00000448912 469 ntBASIC17.44■□□□□ 0.38
CLDN4O14493 HOMER2P1-201ENST00000455653 964 ntBASIC17.44■□□□□ 0.38
CLDN4O14493 AC092647.4-201ENST00000457211 535 ntBASIC17.44■□□□□ 0.38
CLDN4O14493 MIR3180-4-201ENST00000582223 153 ntBASIC17.44■□□□□ 0.38
CLDN4O14493 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN4O14493 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN4O14493 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN4O14493 AC006011.2-201ENST00000621313 1158 ntBASIC17.44■□□□□ 0.38
CLDN4O14493 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN4O14493 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN4O14493 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN4O14493 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLDN4O14493 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN4O14493 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN4O14493 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLDN4O14493 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLDN4O14493 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN4O14493 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN4O14493 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN4O14493 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN4O14493 GCSHP2-201ENST00000560971 527 ntBASIC17.43■□□□□ 0.38
CLDN4O14493 AL049597.2-201ENST00000565575 961 ntBASIC17.43■□□□□ 0.38
CLDN4O14493 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CLDN4O14493 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN4O14493 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN4O14493 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN4O14493 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CLDN4O14493 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 MYLKP1-201ENST00000509077 1580 ntBASIC17.42■□□□□ 0.38
CLDN4O14493 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CLDN4O14493 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN4O14493 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CLDN4O14493 SEC1P-202ENST00000473944 940 ntBASIC17.42■□□□□ 0.38
CLDN4O14493 DUX4L26-201ENST00000489078 1255 ntBASIC17.42■□□□□ 0.38
CLDN4O14493 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN4O14493 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN4O14493 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN4O14493 AL441883.1-201ENST00000566170 1045 ntBASIC17.42■□□□□ 0.38
CLDN4O14493 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN4O14493 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN4O14493 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLDN4O14493 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms