Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.11■□□□□ 0.49
TAF4O00268 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.11■□□□□ 0.49
TAF4O00268 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TAF4O00268 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.11■□□□□ 0.49
TAF4O00268 KRT18P31-201ENST00000506277 1292 ntBASIC18.11■□□□□ 0.49
TAF4O00268 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.11■□□□□ 0.49
TAF4O00268 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.11■□□□□ 0.49
TAF4O00268 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TAF4O00268 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.11■□□□□ 0.49
TAF4O00268 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.11■□□□□ 0.49
TAF4O00268 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.11■□□□□ 0.49
TAF4O00268 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
TAF4O00268 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TAF4O00268 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.11■□□□□ 0.49
TAF4O00268 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
TAF4O00268 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TAF4O00268 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TAF4O00268 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.11■□□□□ 0.49
TAF4O00268 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TAF4O00268 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TAF4O00268 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.1■□□□□ 0.49
TAF4O00268 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.1■□□□□ 0.49
TAF4O00268 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
TAF4O00268 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.1■□□□□ 0.49
TAF4O00268 FOSL1P1-201ENST00000511041 816 ntBASIC18.1■□□□□ 0.49
TAF4O00268 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.1■□□□□ 0.49
TAF4O00268 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.1■□□□□ 0.49
TAF4O00268 AL121912.1-201ENST00000603683 238 ntBASIC18.1■□□□□ 0.49
TAF4O00268 AL355385.1-201ENST00000606123 409 ntBASIC18.1■□□□□ 0.49
TAF4O00268 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TAF4O00268 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TAF4O00268 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TAF4O00268 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.09■□□□□ 0.49
TAF4O00268 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.09■□□□□ 0.49
TAF4O00268 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TAF4O00268 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.09■□□□□ 0.49
TAF4O00268 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 TSPY12P-201ENST00000421279 868 ntBASIC18.09■□□□□ 0.49
TAF4O00268 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.09■□□□□ 0.49
TAF4O00268 RASA4DP-201ENST00000460726 1199 ntBASIC18.09■□□□□ 0.49
TAF4O00268 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.09■□□□□ 0.49
TAF4O00268 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
TAF4O00268 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TAF4O00268 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TAF4O00268 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TAF4O00268 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
TAF4O00268 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.08■□□□□ 0.49
TAF4O00268 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms