Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.72■□□□□ 0.59
AP3B1O00203 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.72■□□□□ 0.59
AP3B1O00203 AC008550.1-201ENST00000511500 884 ntBASIC18.72■□□□□ 0.59
AP3B1O00203 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.72■□□□□ 0.59
AP3B1O00203 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.72■□□□□ 0.59
AP3B1O00203 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.72■□□□□ 0.59
AP3B1O00203 AC009065.1-201ENST00000564055 1225 ntBASIC18.72■□□□□ 0.59
AP3B1O00203 AL353719.1-201ENST00000566847 864 ntBASIC18.72■□□□□ 0.59
AP3B1O00203 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 AC026471.1-201ENST00000564629 3026 ntBASIC18.72■□□□□ 0.59
AP3B1O00203 HOXB1-202ENST00000577092 1414 ntBASIC18.72■□□□□ 0.59
AP3B1O00203 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.72■□□□□ 0.59
AP3B1O00203 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
AP3B1O00203 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.72■□□□□ 0.59
AP3B1O00203 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
AP3B1O00203 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
AP3B1O00203 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3B1O00203 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
AP3B1O00203 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
AP3B1O00203 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3B1O00203 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.71■□□□□ 0.59
AP3B1O00203 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.71■□□□□ 0.59
AP3B1O00203 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3B1O00203 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.71■□□□□ 0.59
AP3B1O00203 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3B1O00203 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3B1O00203 AL023803.3-201ENST00000615559 522 ntBASIC18.71■□□□□ 0.59
AP3B1O00203 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3B1O00203 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3B1O00203 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 KRT17P2-201ENST00000300992 1314 ntBASIC18.71■□□□□ 0.59
AP3B1O00203 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
AP3B1O00203 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3B1O00203 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 NOC2LP1-202ENST00000452600 2235 ntBASIC18.7■□□□□ 0.58
AP3B1O00203 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP3B1O00203 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.7■□□□□ 0.58
AP3B1O00203 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.7■□□□□ 0.58
AP3B1O00203 RBM17P1-201ENST00000453646 1190 ntBASIC18.7■□□□□ 0.58
AP3B1O00203 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
AP3B1O00203 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.7■□□□□ 0.58
AP3B1O00203 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3B1O00203 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
AP3B1O00203 KRT8P50-201ENST00000562022 1438 ntBASIC18.7■□□□□ 0.58
AP3B1O00203 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.7■□□□□ 0.58
AP3B1O00203 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.7■□□□□ 0.58
AP3B1O00203 TMEM191A-211ENST00000637163 1067 ntBASIC18.7■□□□□ 0.58
AP3B1O00203 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.7■□□□□ 0.58
AP3B1O00203 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP3B1O00203 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3B1O00203 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
AP3B1O00203 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3B1O00203 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
AP3B1O00203 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
AP3B1O00203 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3B1O00203 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.69■□□□□ 0.58
AP3B1O00203 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
AP3B1O00203 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3B1O00203 BX088651.1-201ENST00000540551 451 ntBASIC18.69■□□□□ 0.58
AP3B1O00203 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.69■□□□□ 0.58
AP3B1O00203 WWOX-216ENST00000569818 525 ntBASIC18.69■□□□□ 0.58
AP3B1O00203 AC116562.4-202ENST00000641738 218 ntBASIC18.69■□□□□ 0.58
AP3B1O00203 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
AP3B1O00203 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP3B1O00203 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms