Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM49D1C9J1S8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 GNAS-203ENST00000306120 1878 ntBASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM49D1C9J1S8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 NIFKP9-201ENST00000419265 221 ntBASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 MYLKP1-201ENST00000509077 1580 ntBASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 LINC00896-202ENST00000609602 2128 ntBASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM49D1C9J1S8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 HTR7P1-201ENST00000538670 1336 ntBASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM49D1C9J1S8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 RPS2P4-201ENST00000476944 856 ntBASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 AC124016.1-201ENST00000609552 612 ntBASIC18.56■□□□□ 0.56
TRIM49D1C9J1S8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms