Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 MIR663A-201ENST00000385250 93 ntBASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 AC060766.5-201ENST00000590539 871 ntBASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 AL121832.2-201ENST00000610979 668 ntBASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 KRT8P3-201ENST00000519669 1449 ntBASIC12.54□□□□□ -0.4
SMIM1B2RUZ4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 POU5F1P3-201ENST00000428824 1078 ntBASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 SOX15-203ENST00000570788 1093 ntBASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 AC073111.5-205ENST00000641717 521 ntBASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM1B2RUZ4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM1B2RUZ4 MYLKP1-201ENST00000509077 1580 ntBASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms