Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC144AA2RUR9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC26.56■■□□□ 1.84
CCDC144AA2RUR9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 AL353801.3-201ENST00000609898 542 ntBASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CCDC144AA2RUR9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 KRT18P31-201ENST00000506277 1292 ntBASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC144AA2RUR9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 FAAHP1-202ENST00000446499 1238 ntBASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 AC099336.1-202ENST00000602961 463 ntBASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 AL121772.3-201ENST00000610840 674 ntBASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
CCDC144AA2RUR9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 VENTXP7-201ENST00000475503 772 ntBASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 AC008687.5-201ENST00000593746 558 ntBASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 NSUN5P1-202ENST00000421140 1535 ntBASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 NSUN5P2-203ENST00000457352 1529 ntBASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC26.52■■□□□ 1.84
CCDC144AA2RUR9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
CCDC144AA2RUR9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 ANO7L1-203ENST00000602586 1720 ntBASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC144AA2RUR9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
CCDC144AA2RUR9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms