Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC097493.4-201ENST00000641197 219 ntBASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 GMCL1P1-201ENST00000463439 1581 ntBASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 LINC01126-201ENST00000623515 1646 ntBASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV5S1A1TA0A578 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AL512604.3-201ENST00000569583 964 ntBASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AC024243.1-201ENST00000609234 778 ntBASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AL024508.2-201ENST00000607749 1894 ntBASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV5S1A1TA0A578 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 NOC2LP2-201ENST00000407594 1944 ntBASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 SLC25A3P1-201ENST00000443844 931 ntBASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 AC141257.4-201ENST00000634557 245 ntBASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 AC136944.6-201ENST00000634818 245 ntBASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV5S1A1TA0A578 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV5S1A1TA0A578 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms