Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC196A0A1B0GTZ2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC196A0A1B0GTZ2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC196A0A1B0GTZ2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC196A0A1B0GTZ2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 TERF1P1-201ENST00000311003 1181 ntBASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC196A0A1B0GTZ2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 BX664615.1-201ENST00000443558 458 ntBASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC196A0A1B0GTZ2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.52■■□□□ 1.03
CCDC196A0A1B0GTZ2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.52■■□□□ 1.03
CCDC196A0A1B0GTZ2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.52■■□□□ 1.03
CCDC196A0A1B0GTZ2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SEC1P-202ENST00000473944 940 ntBASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC024243.1-201ENST00000609234 778 ntBASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC092865.7-201ENST00000641832 219 ntBASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC073508.3-201ENST00000619697 1419 ntBASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC196A0A1B0GTZ2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms