Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV25-1A0A075B6N4 IRX1P1-201ENST00000438849 1838 ntBASIC13.39□□□□□ -0.27
TRBV25-1A0A075B6N4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV25-1A0A075B6N4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV25-1A0A075B6N4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 GUSBP6-202ENST00000438529 1198 ntBASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 KRT18P16-201ENST00000510337 1294 ntBASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 AC120498.8-201ENST00000614275 531 ntBASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV25-1A0A075B6N4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 AC012317.2-201ENST00000623305 2251 ntBASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 PRKY-204ENST00000533551 1019 ntBASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 SOX15-203ENST00000570788 1093 ntBASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 AC008687.6-201ENST00000596318 630 ntBASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 SDHAP1-207ENST00000440850 2000 ntBASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV25-1A0A075B6N4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV25-1A0A075B6N4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV25-1A0A075B6N4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV25-1A0A075B6N4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV25-1A0A075B6N4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV25-1A0A075B6N4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms