Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 MIR4497-201ENST00000583208 89 ntBASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 AC093525.10-201ENST00000625130 1569 ntBASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 CRYGFP-201ENST00000418459 633 ntBASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 RBM17P1-201ENST00000453646 1190 ntBASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 CA15P1-201ENST00000481698 905 ntBASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 HTR7P1-202ENST00000624664 4411 ntBASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DRB4X5D2U9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 AC093827.2-201ENST00000512654 315 ntBASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DRB4X5D2U9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 Z98044.1-201ENST00000632503 1764 ntBASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 AL512353.2-201ENST00000448759 1962 ntBASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DRB4X5D2U9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms