Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 KRT8P50-201ENST00000562022 1438 ntBASIC21.18■□□□□ 0.98
CLIC4Q9Y696 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CLIC4Q9Y696 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 AC067852.2-201ENST00000590513 2313 ntBASIC21.17■□□□□ 0.98
CLIC4Q9Y696 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 AP005242.2-201ENST00000580065 1175 ntBASIC21.17■□□□□ 0.98
CLIC4Q9Y696 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.17■□□□□ 0.98
CLIC4Q9Y696 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.17■□□□□ 0.98
CLIC4Q9Y696 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 AL390955.1-201ENST00000428694 934 ntBASIC21.16■□□□□ 0.98
CLIC4Q9Y696 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 AL023803.3-201ENST00000615559 522 ntBASIC21.16■□□□□ 0.98
CLIC4Q9Y696 TMEM191A-211ENST00000637163 1067 ntBASIC21.16■□□□□ 0.98
CLIC4Q9Y696 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 AIRN-201ENST00000601203 4374 ntBASIC21.16■□□□□ 0.98
CLIC4Q9Y696 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 LETM1P2-201ENST00000597330 2178 ntBASIC21.16■□□□□ 0.98
CLIC4Q9Y696 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC4Q9Y696 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 AC034236.2-201ENST00000606662 1610 ntBASIC21.15■□□□□ 0.98
CLIC4Q9Y696 AC036111.1-201ENST00000533973 1582 ntBASIC21.15■□□□□ 0.98
CLIC4Q9Y696 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 AP000525.1-201ENST00000608286 694 ntBASIC21.15■□□□□ 0.98
CLIC4Q9Y696 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.15■□□□□ 0.98
CLIC4Q9Y696 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.15■□□□□ 0.98
CLIC4Q9Y696 PCDHB18P-201ENST00000524813 2368 ntBASIC21.15■□□□□ 0.98
CLIC4Q9Y696 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms