Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC114341.1-201ENST00000618070 349 ntBASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 AF228730.7-201ENST00000641842 219 ntBASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 AC093484.2-201ENST00000580996 2166 ntBASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 AL138831.2-201ENST00000606564 490 ntBASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN10AQ9Y5Y9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCN10AQ9Y5Y9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.27■□□□□ 0.83
SCN10AQ9Y5Y9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCN10AQ9Y5Y9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN10AQ9Y5Y9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCN10AQ9Y5Y9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SCN10AQ9Y5Y9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN10AQ9Y5Y9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 AC064862.7-201ENST00000604520 867 ntBASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN10AQ9Y5Y9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 AL161938.1-201ENST00000569833 2180 ntBASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 AL591684.3-201ENST00000605187 298 ntBASIC20.25■□□□□ 0.83
SCN10AQ9Y5Y9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms