Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 UBE2SP1-201ENST00000450587 669 ntBASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 AC011506.1-201ENST00000474329 610 ntBASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 AC130371.2-201ENST00000619443 611 ntBASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RHBDD3Q9Y3P4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 PRSS44-201ENST00000515154 1146 ntBASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 CD177P1-201ENST00000606252 935 ntBASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 MIR6786-201ENST00000616843 113 ntBASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RHBDD3Q9Y3P4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 B3GAT3P1-201ENST00000471720 806 ntBASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDD3Q9Y3P4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms