Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 AC011298.2-201ENST00000617989 482 ntBASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP2BQ9UQN3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.89■□□□□ 0.62
CHMP2BQ9UQN3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP2BQ9UQN3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CHMP2BQ9UQN3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 AC008040.2-201ENST00000461049 708 ntBASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 CR392000.1-201ENST00000624770 1228 ntBASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 KRT16P1-201ENST00000399124 1418 ntBASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP2BQ9UQN3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 AC008764.6-201ENST00000595909 2069 ntBASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 C1QBPP2-201ENST00000528754 825 ntBASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 CKBP1-201ENST00000565489 1086 ntBASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2BQ9UQN3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2BQ9UQN3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms