Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP4E1Q9UPM8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 AC133561.5-201ENST00000635547 218 ntBASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP4E1Q9UPM8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 AC009947.2-201ENST00000444014 672 ntBASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 AL512604.3-201ENST00000569583 964 ntBASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 KRT8P7-201ENST00000533003 1432 ntBASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AP4E1Q9UPM8 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4E1Q9UPM8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms