Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 FAM197Y3-203ENST00000618346 717 ntBASIC17.51■□□□□ 0.39
LHX6Q9UPM6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LHX6Q9UPM6 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.5■□□□□ 0.39
LHX6Q9UPM6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 AL391807.1-203ENST00000604392 2365 ntBASIC17.5■□□□□ 0.39
LHX6Q9UPM6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 COX20P2-201ENST00000452636 358 ntBASIC17.5■□□□□ 0.39
LHX6Q9UPM6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 RFPL4AP1-201ENST00000530883 850 ntBASIC17.5■□□□□ 0.39
LHX6Q9UPM6 AC006518.1-201ENST00000541449 943 ntBASIC17.5■□□□□ 0.39
LHX6Q9UPM6 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.5■□□□□ 0.39
LHX6Q9UPM6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LHX6Q9UPM6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 AC060766.1-201ENST00000590824 627 ntBASIC17.49■□□□□ 0.39
LHX6Q9UPM6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX6Q9UPM6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.48■□□□□ 0.39
LHX6Q9UPM6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms