Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 MIR149-201ENST00000384879 89 ntBASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 ANO7L1-203ENST00000602586 1720 ntBASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.86■□□□□ 0.77
UBQLN1Q9UMX0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 AC069148.1-201ENST00000608741 768 ntBASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 AL499627.1-201ENST00000569373 2188 ntBASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 AC009102.3-201ENST00000623118 1491 ntBASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN1Q9UMX0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 AC011498.5-201ENST00000592027 486 ntBASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBQLN1Q9UMX0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.83■□□□□ 0.77
UBQLN1Q9UMX0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
UBQLN1Q9UMX0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.83■□□□□ 0.77
UBQLN1Q9UMX0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN1Q9UMX0 AL031598.1-201ENST00000561511 1773 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms