Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 GABARAPL3-202ENST00000624044 1851 ntBASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AP002469.2-201ENST00000531724 424 ntBASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC092329.2-201ENST00000598402 547 ntBASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC104692.2-201ENST00000603054 253 ntBASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 TSPY22P-201ENST00000427496 604 ntBASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 KRT18P31-201ENST00000506277 1292 ntBASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 AC006538.3-201ENST00000612495 578 ntBASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NOTCH3Q9UM47 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NOTCH3Q9UM47 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.29□□□□□ -0.12
NOTCH3Q9UM47 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NOTCH3Q9UM47 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NOTCH3Q9UM47 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NOTCH3Q9UM47 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms