Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 RCC2P3-201ENST00000418112 1537 ntBASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 FAM8A6P-201ENST00000407496 1135 ntBASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 AC068587.9-201ENST00000641814 219 ntBASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 MTMR9LP-203ENST00000426597 1545 ntBASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.95■□□□□ 0.78
GTF3C4Q9UKN8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 KRT8P32-201ENST00000512863 1461 ntBASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 AC008556.1-201ENST00000610908 2040 ntBASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 MIR3180-5-201ENST00000583743 153 ntBASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 AC135050.7-201ENST00000624508 2218 ntBASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GTF3C4Q9UKN8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 AP000523.1-201ENST00000398242 1049 ntBASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 AC092647.4-201ENST00000457211 535 ntBASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 GCSHP2-201ENST00000560971 527 ntBASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 LINC01238-205ENST00000567549 1107 ntBASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 AC087388.1-201ENST00000571370 1112 ntBASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
GTF3C4Q9UKN8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms