Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 AL591424.1-201ENST00000442569 1213 ntBASIC23.53■■□□□ 1.36
CCNL1Q9UK58 SART3-203ENST00000546611 1184 ntBASIC23.53■■□□□ 1.36
CCNL1Q9UK58 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNL1Q9UK58 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 AC092910.1-201ENST00000482027 1129 ntBASIC23.52■■□□□ 1.36
CCNL1Q9UK58 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 AC022898.2-201ENST00000616822 1312 ntBASIC23.52■■□□□ 1.36
CCNL1Q9UK58 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.52■■□□□ 1.36
CCNL1Q9UK58 HLA-J-201ENST00000462773 1622 ntBASIC23.51■■□□□ 1.35
CCNL1Q9UK58 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.51■■□□□ 1.35
CCNL1Q9UK58 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCNL1Q9UK58 INTS4P1-201ENST00000438455 1935 ntBASIC23.51■■□□□ 1.35
CCNL1Q9UK58 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 AL163051.1-201ENST00000569214 1512 ntBASIC23.5■■□□□ 1.35
CCNL1Q9UK58 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 YBX2P1-201ENST00000394192 760 ntBASIC23.5■■□□□ 1.35
CCNL1Q9UK58 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 KRT18P3-201ENST00000451602 1288 ntBASIC23.5■■□□□ 1.35
CCNL1Q9UK58 AC012640.2-201ENST00000561606 901 ntBASIC23.5■■□□□ 1.35
CCNL1Q9UK58 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 Z83851.2-201ENST00000609564 659 ntBASIC23.5■■□□□ 1.35
CCNL1Q9UK58 AL137060.1-201ENST00000618151 2648 ntBASIC23.5■■□□□ 1.35
CCNL1Q9UK58 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCNL1Q9UK58 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 AC068472.1-201ENST00000474589 881 ntBASIC23.49■■□□□ 1.35
CCNL1Q9UK58 AC112482.1-201ENST00000492080 688 ntBASIC23.49■■□□□ 1.35
CCNL1Q9UK58 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 AC113404.2-201ENST00000507884 177 ntBASIC23.49■■□□□ 1.35
CCNL1Q9UK58 AC009533.2-201ENST00000543664 586 ntBASIC23.49■■□□□ 1.35
CCNL1Q9UK58 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 AP005117.1-201ENST00000584346 1413 ntBASIC23.49■■□□□ 1.35
CCNL1Q9UK58 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCNL1Q9UK58 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms