Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 AC004461.1-201ENST00000412461 403 ntBASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 AC125634.1-201ENST00000438758 1403 ntBASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC29.36■■■□□ 2.29
RIMBP3Q9UFD9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 AL512353.2-201ENST00000448759 1962 ntBASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RIMBP3Q9UFD9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 AP002414.1-201ENST00000391405 1147 ntBASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 UGT1A2P-201ENST00000454886 866 ntBASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 AC113404.2-201ENST00000507884 177 ntBASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC29.34■■■□□ 2.29
RIMBP3Q9UFD9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 TFAMP1-201ENST00000412727 736 ntBASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 AC025678.2-201ENST00000562061 970 ntBASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 AC015911.4-201ENST00000588022 1070 ntBASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RIMBP3Q9UFD9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 AC084346.2-201ENST00000607097 949 ntBASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RIMBP3Q9UFD9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 AC004835.2-201ENST00000603762 682 ntBASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 FAM58CP-201ENST00000435741 640 ntBASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 MIR4751-201ENST00000578027 74 ntBASIC29.31■■■□□ 2.28
RIMBP3Q9UFD9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 BX005266.1-201ENST00000473402 457 ntBASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 GUSBP5-202ENST00000510805 1989 ntBASIC29.3■■■□□ 2.28
RIMBP3Q9UFD9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms