Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17■□□□□ 0.31
LRFN1Q9P244 BX276092.5-203ENST00000456199 560 ntBASIC17■□□□□ 0.31
LRFN1Q9P244 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRFN1Q9P244 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17■□□□□ 0.31
LRFN1Q9P244 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17■□□□□ 0.31
LRFN1Q9P244 MIR3180-4-201ENST00000582223 153 ntBASIC17■□□□□ 0.31
LRFN1Q9P244 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17■□□□□ 0.31
LRFN1Q9P244 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 AL121672.3-201ENST00000608644 468 ntBASIC17■□□□□ 0.31
LRFN1Q9P244 AC005332.7-201ENST00000614046 2005 ntBASIC17■□□□□ 0.31
LRFN1Q9P244 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17■□□□□ 0.31
LRFN1Q9P244 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRFN1Q9P244 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 AL357033.4-201ENST00000617703 1807 ntBASIC17■□□□□ 0.31
LRFN1Q9P244 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17■□□□□ 0.31
LRFN1Q9P244 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17■□□□□ 0.31
LRFN1Q9P244 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17■□□□□ 0.31
LRFN1Q9P244 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17■□□□□ 0.31
LRFN1Q9P244 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRFN1Q9P244 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRFN1Q9P244 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRFN1Q9P244 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 KRT18P48-201ENST00000434763 852 ntBASIC16.99■□□□□ 0.31
LRFN1Q9P244 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRFN1Q9P244 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.99■□□□□ 0.31
LRFN1Q9P244 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRFN1Q9P244 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRFN1Q9P244 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 AC090340.1-201ENST00000620778 4980 ntBASIC16.98■□□□□ 0.31
LRFN1Q9P244 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 MIR662-201ENST00000384847 95 ntBASIC16.98■□□□□ 0.31
LRFN1Q9P244 ATP5G2P1-201ENST00000433580 426 ntBASIC16.98■□□□□ 0.31
LRFN1Q9P244 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 AC009065.1-201ENST00000564055 1225 ntBASIC16.98■□□□□ 0.31
LRFN1Q9P244 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.98■□□□□ 0.31
LRFN1Q9P244 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRFN1Q9P244 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 AL049812.1-201ENST00000432563 2267 ntBASIC16.97■□□□□ 0.31
LRFN1Q9P244 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 PVRIG2P-201ENST00000435460 978 ntBASIC16.97■□□□□ 0.31
LRFN1Q9P244 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms