Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDE1Q9NXR1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
NDE1Q9NXR1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 AD000864.1-201ENST00000624076 2295 ntBASIC17.95■□□□□ 0.46
NDE1Q9NXR1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 AC011767.1-201ENST00000617410 1153 ntBASIC17.95■□□□□ 0.46
NDE1Q9NXR1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 AC124283.5-201ENST00000624661 1809 ntBASIC17.95■□□□□ 0.46
NDE1Q9NXR1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.95■□□□□ 0.46
NDE1Q9NXR1 AC093677.2-201ENST00000600169 1863 ntBASIC17.95■□□□□ 0.46
NDE1Q9NXR1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDE1Q9NXR1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 AC034268.1-201ENST00000441047 882 ntBASIC17.94■□□□□ 0.46
NDE1Q9NXR1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 AC093787.1-201ENST00000450396 207 ntBASIC17.94■□□□□ 0.46
NDE1Q9NXR1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms