Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.64■□□□□ 0.74
TLR9Q9NR96 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TLR9Q9NR96 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TLR9Q9NR96 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.64■□□□□ 0.73
TLR9Q9NR96 AC091607.1-201ENST00000490318 1060 ntBASIC19.64■□□□□ 0.73
TLR9Q9NR96 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.64■□□□□ 0.73
TLR9Q9NR96 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TLR9Q9NR96 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.64■□□□□ 0.73
TLR9Q9NR96 IRX1P1-201ENST00000438849 1838 ntBASIC19.64■□□□□ 0.73
TLR9Q9NR96 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
TLR9Q9NR96 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.64■□□□□ 0.73
TLR9Q9NR96 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TLR9Q9NR96 AIRN-201ENST00000601203 4374 ntBASIC19.64■□□□□ 0.73
TLR9Q9NR96 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 AFG3L1P-217ENST00000557444 2447 ntBASIC19.63■□□□□ 0.73
TLR9Q9NR96 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 AP001005.1-201ENST00000571755 1248 ntBASIC19.63■□□□□ 0.73
TLR9Q9NR96 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 TP73-AS1-207ENST00000624167 988 ntBASIC19.63■□□□□ 0.73
TLR9Q9NR96 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TLR9Q9NR96 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.63■□□□□ 0.73
TLR9Q9NR96 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 PMS2P1-201ENST00000431037 1228 ntBASIC19.62■□□□□ 0.73
TLR9Q9NR96 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 AC117500.6-201ENST00000624871 588 ntBASIC19.62■□□□□ 0.73
TLR9Q9NR96 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TLR9Q9NR96 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.62■□□□□ 0.73
TLR9Q9NR96 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 POM121L3P-201ENST00000419331 1163 ntBASIC19.61■□□□□ 0.73
TLR9Q9NR96 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 AL773604.1-201ENST00000617417 272 ntBASIC19.61■□□□□ 0.73
TLR9Q9NR96 AF228730.7-201ENST00000641842 219 ntBASIC19.61■□□□□ 0.73
TLR9Q9NR96 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.61■□□□□ 0.73
TLR9Q9NR96 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TLR9Q9NR96 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms