Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 AC007663.1-201ENST00000438948 1240 ntBASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 AC128688.1-201ENST00000487626 519 ntBASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 AL353719.1-201ENST00000566847 864 ntBASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 AC020763.4-201ENST00000623414 4170 ntBASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 TSPY17P-201ENST00000450329 467 ntBASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NECTIN3Q9NQS3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NECTIN3Q9NQS3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.77■□□□□ 0.43
NECTIN3Q9NQS3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NECTIN3Q9NQS3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NECTIN3Q9NQS3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.77■□□□□ 0.43
NECTIN3Q9NQS3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 FAM87A-204ENST00000613235 858 ntBASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 AC008622.2-201ENST00000617006 1229 ntBASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 AL161938.1-201ENST00000569833 2180 ntBASIC17.76■□□□□ 0.43
NECTIN3Q9NQS3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 AP003041.3-201ENST00000527151 707 ntBASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 AC005363.2-201ENST00000618631 242 ntBASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms