Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 REXO1L10P-201ENST00000615707 1290 ntBASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 REXO1L12P-201ENST00000622156 912 ntBASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 MYC-208ENST00000641036 567 ntBASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC68Q9H2F9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 Z99916.2-201ENST00000604037 246 ntBASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC68Q9H2F9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 MTMR9LP-203ENST00000426597 1545 ntBASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 AC104581.1-202ENST00000635932 2618 ntBASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 CRYGFP-201ENST00000418459 633 ntBASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC68Q9H2F9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC68Q9H2F9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 AP003071.4-201ENST00000562276 1284 ntBASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 MIR4785-201ENST00000585005 73 ntBASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC68Q9H2F9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms