Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 MIR3180-4-201ENST00000582223 153 ntBASIC17.59■□□□□ 0.41
SPTBN4Q9H254 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 NME2P1-201ENST00000426182 414 ntBASIC17.58■□□□□ 0.41
SPTBN4Q9H254 UGT1A2P-201ENST00000454886 866 ntBASIC17.58■□□□□ 0.41
SPTBN4Q9H254 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.58■□□□□ 0.41
SPTBN4Q9H254 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 AC023141.5-201ENST00000458585 616 ntBASIC17.58■□□□□ 0.4
SPTBN4Q9H254 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPTBN4Q9H254 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 AC116407.2-201ENST00000613639 860 ntBASIC17.57■□□□□ 0.4
SPTBN4Q9H254 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 INGX-202ENST00000489074 768 ntBASIC17.57■□□□□ 0.4
SPTBN4Q9H254 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 AC015911.4-201ENST00000588022 1070 ntBASIC17.57■□□□□ 0.4
SPTBN4Q9H254 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPTBN4Q9H254 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.56■□□□□ 0.4
SPTBN4Q9H254 ACTG1P14-201ENST00000446382 1122 ntBASIC17.56■□□□□ 0.4
SPTBN4Q9H254 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 AC051619.7-201ENST00000568314 623 ntBASIC17.56■□□□□ 0.4
SPTBN4Q9H254 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 AC008556.1-201ENST00000610908 2040 ntBASIC17.56■□□□□ 0.4
SPTBN4Q9H254 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 AC073621.1-201ENST00000392730 636 ntBASIC17.56■□□□□ 0.4
SPTBN4Q9H254 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 DUX4L27-201ENST00000554796 1261 ntBASIC17.56■□□□□ 0.4
SPTBN4Q9H254 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 AC022145.2-201ENST00000598203 171 ntBASIC17.56■□□□□ 0.4
SPTBN4Q9H254 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPTBN4Q9H254 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPTBN4Q9H254 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.55■□□□□ 0.4
SPTBN4Q9H254 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPTBN4Q9H254 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms