Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 ABCB10P4-201ENST00000566803 2184 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 RN7SKP291-201ENST00000362961 327 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 RPL31-202ENST00000409000 641 ntTSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 RN7SKP264-201ENST00000411080 289 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 RN7SKP161-201ENST00000411110 305 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 KRR1P1-201ENST00000419430 803 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 BX284668.1-202ENST00000422345 735 ntTSL 5 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AL357520.1-201ENST00000441557 453 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC244197.1-201ENST00000456494 951 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AL157400.5-201ENST00000507624 621 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC117522.3-201ENST00000507974 584 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 KBTBD11-OT1-201ENST00000518539 815 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC118273.2-201ENST00000532092 465 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 OR4A6P-201ENST00000534364 970 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC092865.1-201ENST00000544395 1023 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AL161670.2-201ENST00000557650 1227 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC099524.1-207ENST00000569731 794 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AL512413.1-201ENST00000606489 382 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 HAR1B-202ENST00000608031 773 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 AC092794.2-201ENST00000620933 563 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 MYOCOS-204ENST00000637642 1549 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 DUSP8P5-201ENST00000422884 1815 ntBASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
KRTAP3-3Q9BYR6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
KRTAP3-3Q9BYR6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC11.52□□□□□ -0.56
KRTAP3-3Q9BYR6 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.52□□□□□ -0.56
KRTAP3-3Q9BYR6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 SPACA7-202ENST00000375699 807 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 RNU6-883P-201ENST00000384597 107 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AC245054.1-201ENST00000420944 258 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 TRBV21-1-201ENST00000453262 348 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 HPRT1P1-201ENST00000509498 657 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 CCDC90B-211ENST00000529073 719 ntTSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AC104383.1-201ENST00000530297 370 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AL136418.1-201ENST00000551799 975 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AC023813.2-201ENST00000564321 469 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AL035422.2-201ENST00000603059 565 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AL353778.1-201ENST00000603149 408 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AC063943.3-201ENST00000615562 356 ntBASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 C2orf15-201ENST00000302513 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms