Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 BCL2-203ENST00000589955 5011 ntBASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 AC091390.4-202ENST00000476426 537 ntBASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 PRSS44-201ENST00000515154 1146 ntBASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 ESPNP-201ENST00000270691 2015 ntBASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 RCC2P3-201ENST00000418112 1537 ntBASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 NIFKP9-201ENST00000419265 221 ntBASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 RPS2P4-201ENST00000476944 856 ntBASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 AC093677.2-201ENST00000600169 1863 ntBASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 KRT8P45-201ENST00000414328 1447 ntBASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 AC112777.1-201ENST00000540175 1423 ntBASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HDHD3Q9BSH5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 MYC-208ENST00000641036 567 ntBASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms