Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3CQ99985 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3CQ99985 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3CQ99985 AP000593.1-201ENST00000393668 712 ntBASIC18.8■□□□□ 0.6
SEMA3CQ99985 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.8■□□□□ 0.6
SEMA3CQ99985 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 AC024243.1-201ENST00000609234 778 ntBASIC18.8■□□□□ 0.6
SEMA3CQ99985 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3CQ99985 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3CQ99985 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3CQ99985 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 AC005082.1-201ENST00000413042 2259 ntBASIC18.79■□□□□ 0.6
SEMA3CQ99985 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 AP000523.1-201ENST00000398242 1049 ntBASIC18.79■□□□□ 0.6
SEMA3CQ99985 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 AL023973.1-201ENST00000624619 620 ntBASIC18.79■□□□□ 0.6
SEMA3CQ99985 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3CQ99985 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3CQ99985 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 BX664615.1-201ENST00000443558 458 ntBASIC18.78■□□□□ 0.6
SEMA3CQ99985 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3CQ99985 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3CQ99985 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA3CQ99985 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SEMA3CQ99985 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms