Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.04■□□□□ 0.96
ARID3AQ99856 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ARID3AQ99856 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.04■□□□□ 0.96
ARID3AQ99856 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.04■□□□□ 0.96
ARID3AQ99856 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
ARID3AQ99856 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.04■□□□□ 0.96
ARID3AQ99856 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.04■□□□□ 0.96
ARID3AQ99856 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.04■□□□□ 0.96
ARID3AQ99856 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.04■□□□□ 0.96
ARID3AQ99856 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ARID3AQ99856 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
ARID3AQ99856 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ARID3AQ99856 AP006587.1-201ENST00000534129 1502 ntBASIC21.04■□□□□ 0.96
ARID3AQ99856 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARID3AQ99856 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.03■□□□□ 0.96
ARID3AQ99856 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.03■□□□□ 0.96
ARID3AQ99856 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.03■□□□□ 0.96
ARID3AQ99856 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.03■□□□□ 0.96
ARID3AQ99856 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.03■□□□□ 0.96
ARID3AQ99856 TMEM191A-211ENST00000637163 1067 ntBASIC21.03■□□□□ 0.96
ARID3AQ99856 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ARID3AQ99856 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID3AQ99856 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.03■□□□□ 0.96
ARID3AQ99856 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARID3AQ99856 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.02■□□□□ 0.96
ARID3AQ99856 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ARID3AQ99856 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 AL023875.1-201ENST00000640777 796 ntBASIC21.02■□□□□ 0.96
ARID3AQ99856 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
ARID3AQ99856 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ARID3AQ99856 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
ARID3AQ99856 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.02■□□□□ 0.95
ARID3AQ99856 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
ARID3AQ99856 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
ARID3AQ99856 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 AL354751.1-201ENST00000412768 1863 ntBASIC21.01■□□□□ 0.95
ARID3AQ99856 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
ARID3AQ99856 AC090164.3-201ENST00000610780 2143 ntBASIC21.01■□□□□ 0.95
ARID3AQ99856 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.01■□□□□ 0.95
ARID3AQ99856 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.01■□□□□ 0.95
ARID3AQ99856 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.01■□□□□ 0.95
ARID3AQ99856 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ARID3AQ99856 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms