Protein–RNA interactions for Protein: Q99439

CNN2, Calponin-2, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2Q99439 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CNN2Q99439 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
CNN2Q99439 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CNN2Q99439 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNN2Q99439 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CNN2Q99439 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNN2Q99439 AP000997.3-201ENST00000623333 2250 ntBASIC16.58■□□□□ 0.25
CNN2Q99439 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNN2Q99439 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNN2Q99439 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CNN2Q99439 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNN2Q99439 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CNN2Q99439 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 NIFKP9-201ENST00000419265 221 ntBASIC16.58■□□□□ 0.24
CNN2Q99439 AC004980.1-204ENST00000429707 299 ntBASIC16.58■□□□□ 0.24
CNN2Q99439 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.58■□□□□ 0.24
CNN2Q99439 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.58■□□□□ 0.24
CNN2Q99439 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 RCC2P3-201ENST00000418112 1537 ntBASIC16.58■□□□□ 0.24
CNN2Q99439 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.58■□□□□ 0.24
CNN2Q99439 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.58■□□□□ 0.24
CNN2Q99439 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CNN2Q99439 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNN2Q99439 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.57■□□□□ 0.24
CNN2Q99439 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.57■□□□□ 0.24
CNN2Q99439 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 AC093677.2-201ENST00000600169 1863 ntBASIC16.57■□□□□ 0.24
CNN2Q99439 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.57■□□□□ 0.24
CNN2Q99439 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CNN2Q99439 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.57■□□□□ 0.24
CNN2Q99439 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CNN2Q99439 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNN2Q99439 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNN2Q99439 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.57■□□□□ 0.24
CNN2Q99439 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.56■□□□□ 0.24
CNN2Q99439 LTB4R2-202ENST00000528054 3092 ntBASIC16.56■□□□□ 0.24
CNN2Q99439 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CNN2Q99439 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNN2Q99439 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CNN2Q99439 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.56■□□□□ 0.24
CNN2Q99439 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CNN2Q99439 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.56■□□□□ 0.24
CNN2Q99439 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.56■□□□□ 0.24
CNN2Q99439 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.56■□□□□ 0.24
CNN2Q99439 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNN2Q99439 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CNN2Q99439 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.56■□□□□ 0.24
CNN2Q99439 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.56■□□□□ 0.24
CNN2Q99439 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.56■□□□□ 0.24
CNN2Q99439 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNN2Q99439 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms