Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 SPDYE13P-201ENST00000445314 798 ntBASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 AC008687.5-201ENST00000593746 558 ntBASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 UPK3BP1-201ENST00000428678 509 ntBASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 MYLKP1-201ENST00000509077 1580 ntBASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP1Q96SZ6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.21■□□□□ 0.67
CDK5RAP1Q96SZ6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 AC009102.3-201ENST00000623118 1491 ntBASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDK5RAP1Q96SZ6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 AL162741.1-201ENST00000565563 1558 ntBASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms