Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.16■□□□□ 0.82
ALPK3Q96L96 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK3Q96L96 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 AL356309.3-201ENST00000624132 1934 ntBASIC20.15■□□□□ 0.82
ALPK3Q96L96 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK3Q96L96 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.15■□□□□ 0.82
ALPK3Q96L96 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ALPK3Q96L96 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.14■□□□□ 0.82
ALPK3Q96L96 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ALPK3Q96L96 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ALPK3Q96L96 KRT8P50-201ENST00000562022 1438 ntBASIC20.14■□□□□ 0.82
ALPK3Q96L96 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ALPK3Q96L96 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.14■□□□□ 0.82
ALPK3Q96L96 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALPK3Q96L96 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 AL645939.2-201ENST00000427340 991 ntBASIC20.14■□□□□ 0.81
ALPK3Q96L96 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 AC107918.4-202ENST00000641623 219 ntBASIC20.14■□□□□ 0.81
ALPK3Q96L96 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
ALPK3Q96L96 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALPK3Q96L96 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALPK3Q96L96 AL391422.3-201ENST00000603791 2761 ntBASIC20.13■□□□□ 0.81
ALPK3Q96L96 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALPK3Q96L96 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.13■□□□□ 0.81
ALPK3Q96L96 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms