Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 KRT89P-201ENST00000620027 1478 ntBASIC15.7■□□□□ 0.1
SPG11Q96JI7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 AC006333.2-201ENST00000607957 2099 ntBASIC15.7■□□□□ 0.1
SPG11Q96JI7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 RPSAP43-201ENST00000402237 625 ntBASIC15.7■□□□□ 0.1
SPG11Q96JI7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 AC096582.2-201ENST00000510860 516 ntBASIC15.7■□□□□ 0.1
SPG11Q96JI7 AC104390.1-201ENST00000555663 520 ntBASIC15.7■□□□□ 0.1
SPG11Q96JI7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 AC239800.4-201ENST00000603712 296 ntBASIC15.69■□□□□ 0.1
SPG11Q96JI7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 AC104109.2-201ENST00000602919 1418 ntBASIC15.69■□□□□ 0.1
SPG11Q96JI7 Z82202.1-201ENST00000623446 1880 ntBASIC15.69■□□□□ 0.1
SPG11Q96JI7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 YBX2P1-201ENST00000394192 760 ntBASIC15.69■□□□□ 0.1
SPG11Q96JI7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 MIR5100-201ENST00000579544 119 ntBASIC15.69■□□□□ 0.1
SPG11Q96JI7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 AL049840.3-201ENST00000602669 611 ntBASIC15.69■□□□□ 0.1
SPG11Q96JI7 AC114341.1-201ENST00000618070 349 ntBASIC15.69■□□□□ 0.1
SPG11Q96JI7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPG11Q96JI7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.69■□□□□ 0.1
SPG11Q96JI7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 AC211486.1-202ENST00000416371 468 ntBASIC15.68■□□□□ 0.1
SPG11Q96JI7 AC098831.1-202ENST00000438821 336 ntBASIC15.68■□□□□ 0.1
SPG11Q96JI7 AC211476.1-201ENST00000503899 468 ntBASIC15.68■□□□□ 0.1
SPG11Q96JI7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 IGHV3-41-201ENST00000613121 348 ntBASIC15.68■□□□□ 0.1
SPG11Q96JI7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 AP005117.1-201ENST00000584346 1413 ntBASIC15.68■□□□□ 0.1
SPG11Q96JI7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 MIR3180-4-201ENST00000582223 153 ntBASIC15.68■□□□□ 0.1
SPG11Q96JI7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 AL512353.2-201ENST00000448759 1962 ntBASIC15.68■□□□□ 0.1
SPG11Q96JI7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.68■□□□□ 0.1
SPG11Q96JI7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPG11Q96JI7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPG11Q96JI7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 AC004832.2-201ENST00000426397 482 ntBASIC15.67■□□□□ 0.1
SPG11Q96JI7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.67■□□□□ 0.1
SPG11Q96JI7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms