Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC092865.7-201ENST00000641832 219 ntBASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 AL162741.1-201ENST00000565563 1558 ntBASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 BICD1-207ENST00000551848 1962 ntBASIC17.19■□□□□ 0.34
CTHRC1Q96CG8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 KRT18P21-201ENST00000515767 1272 ntBASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 AL023973.1-201ENST00000624619 620 ntBASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTHRC1Q96CG8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 AC117947.1-201ENST00000427448 529 ntBASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 AL441883.1-201ENST00000566170 1045 ntBASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTHRC1Q96CG8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 KRT18P57-201ENST00000443599 1254 ntBASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 YBX1P2-201ENST00000489612 999 ntBASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 AC140113.3-201ENST00000605663 199 ntBASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 AC139887.4-201ENST00000607877 719 ntBASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 AC011558.1-201ENST00000623459 338 ntBASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTHRC1Q96CG8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms