Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A3Q93084 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A3Q93084 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A3Q93084 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A3Q93084 AC116407.4-201ENST00000623319 1061 ntBASIC19.52■□□□□ 0.72
ATP2A3Q93084 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A3Q93084 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A3Q93084 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATP2A3Q93084 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A3Q93084 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATP2A3Q93084 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A3Q93084 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A3Q93084 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
ATP2A3Q93084 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A3Q93084 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A3Q93084 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.52■□□□□ 0.71
ATP2A3Q93084 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.52■□□□□ 0.71
ATP2A3Q93084 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A3Q93084 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 ZNF444P1-201ENST00000559497 298 ntBASIC19.51■□□□□ 0.71
ATP2A3Q93084 AL136038.3-201ENST00000561909 1096 ntBASIC19.51■□□□□ 0.71
ATP2A3Q93084 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A3Q93084 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A3Q93084 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 KRT18P56-201ENST00000507275 550 ntBASIC19.5■□□□□ 0.71
ATP2A3Q93084 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 AC093458.2-201ENST00000623150 629 ntBASIC19.5■□□□□ 0.71
ATP2A3Q93084 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A3Q93084 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 LINC01311-201ENST00000565162 1445 ntBASIC19.5■□□□□ 0.71
ATP2A3Q93084 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A3Q93084 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 AC083849.1-201ENST00000615227 514 ntBASIC19.49■□□□□ 0.71
ATP2A3Q93084 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A3Q93084 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATP2A3Q93084 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms